Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922253.1_cds_XP_016471078.1_63459
CDS Infomation

[gene=LOC107793271] [db_xref=GeneID:107793271] [protein=cyclase-associated protein 1-like] [protein_id=XP_016471078.1] [location=join(14152..14436,15507..15672,15745..15809,16721..17030,17101..17248,17330..17439,17535..17590,17685..17741,17867..18010,18284..18370)] [gbkey=CDS]
Sequence

ATGTCAATGGAGGAGAAGTTGATACAGCGATTGGAGTCGGCGGTGACGCGGCTGGAGGCG
CTATCATCCACCGGCTTCCGTTCCGGAGGTTCCGTCGGGACAGGCAATGCTACGGTGGCT
TTAGATCCGTCGATTATTGCATTTGACGATCTGAGGTCGGAGTTCCTCGGGAAGGTTACG
AGTGCTGCGGAGAAGATCGGAGGAAAAGTATTGGATATTACTAAGATGGTTGAGAAGGCT
TTCTCCGCTCAGAGAGAACTTCTCATTAAAATCAAGGAGACTAAGAAACCAGACAACTCA
GGTTTGGTTGAATTTCTCAAACCTTTGAATGATGCGATCGTGAAAGCTACAAGAATGACT
GAAGGACGGCCTGATTTCTTCAACCACTTGAAGTCTGCTGCTGATAGTCTATCTGCTCTT
GCATGGATTGCCTACACTGGAAAAGATTGCGGCCTAAGCATGCCTATTGCGCACGTGGAA
GAAAGTTGGCAGATGGCTGAATTTTATAATAACAAGATTCTTGTGGAGTTCAAAAACAAA
GATGCAAATCATGCTGAGTGGGCAAAGGCTTTGAAAGAACTTTATCTCCCTGGCTTGAGA
GATTATGTTAAGAGCCACTATCCATTAGGTCCTGTATGGAGTGCAACAGGGAAAGCTGCT
GTATCTGCACCATCAAAAGCTTCTTCACCAAGTGCTCCTGCTCCTCCGGCTCCACCTCCA
GCTTCTCTCTTCAGCTCTACATCTCCTCAGGCTTCATCATCACGCCCCAAGCAAGGGATG
GCTGCTGTTTTTGATGAAATTAATTCAGGAAAGCCAGTGACTTCTGGATTGAGAAAGGTA
ACAGATGATATGAAGGCAAAGAACCGTGCTGACAGAACAGGCGTTGTTAATGCTGGTGAA
AAAGAAGCCCGCATGAGCTCACCCTATATCTCTAAAACTGGACCTGCAAAATTGGAGCTT
CAGATGGGCCGTAAATGGGTGGTTGAGAATCAAGTGGGAGAGAAGAATCTAGTTATTGAT
GACTGTGATGCAAAGCAATCAGTATATGTCTATGGGTGCAAAGGTTCAGTTCTTCAGATC
AAAGGAAAAGTCAACAACATCACAATTGACAAGTGCACTAAGATGGGAGTTGTATTTGCG
GGTGTAGTGGCAGCTTGTGAGGTTGTCAATTGCAATGGTGTGGAGGTGCAATGTCAGGGC
TCGGCTCCTACAATATCAGTCGACAATACAACTGGGTGCCAGTTATACTTGAGCAAAGAT
TCTTTGGGGGGTTCTATTACCACAGCTAAGTCGAGTGAAATCAATGTTATGGTTCCTGGT
GCAGGGCCTGATGATGATTGGGGTGAGCATGCTTTGCCACAGCAGTATGCTCATGTATAC
AAGGATGGACACTTTGTGACTACTCCTGTCTCCCACTCTGGAGCTTAA

Peptide Sequence

PEP ID

XP_016471078.1
PEP Infomation

PREDICTED: cyclase-associated protein 1-like [Nicotiana tabacum]
Sequence

MSMEEKLIQRLESAVTRLEALSSTGFRSGGSVGTGNATVALDPSIIAFDDLRSEFLGKVT
SAAEKIGGKVLDITKMVEKAFSAQRELLIKIKETKKPDNSGLVEFLKPLNDAIVKATRMT
EGRPDFFNHLKSAADSLSALAWIAYTGKDCGLSMPIAHVEESWQMAEFYNNKILVEFKNK
DANHAEWAKALKELYLPGLRDYVKSHYPLGPVWSATGKAAVSAPSKASSPSAPAPPAPPP
ASLFSSTSPQASSSRPKQGMAAVFDEINSGKPVTSGLRKVTDDMKAKNRADRTGVVNAGE
KEARMSSPYISKTGPAKLELQMGRKWVVENQVGEKNLVIDDCDAKQSVYVYGCKGSVLQI
KGKVNNITIDKCTKMGVVFAGVVAACEVVNCNGVEVQCQGSAPTISVDNTTGCQLYLSKD
SLGGSITTAKSSEINVMVPGAGPDDDWGEHALPQQYAHVYKDGHFVTTPVSHSGA

Transcript Sequence

Gene sequence data has not been registered.